Difference between revisions of "CapE"

From SubtiWiki
Jump to: navigation, search
(Categories containing this gene/protein)
(Categories containing this gene/protein)
Line 32: Line 32:
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[capsule bioynthesis and degradation]]}}
+
{{SubtiWiki category|[[capsule biosynthesis and degradation]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =

Revision as of 11:58, 8 November 2011

  • Description: stimulates poly-gamma-glutamate production in the presence of zinc, also involved in extra-chromosomal DNA maintenance

Gene name capE
Synonyms ywtC, pgsE
Essential no
Product unknown
Function capsule synthesis
MW, pI 6 kDa, 6.487
Gene length, protein length 165 bp, 55 aa
Immediate neighbours pgdS, capA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwtC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

capsule biosynthesis and degradation

This gene is a member of the following regulons

DegU regulon

The gene

Basic information

  • Locus tag: BSU35870

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: stimulates poly-gamma-glutamate production in the presence of zinc PubMed, also involved in extra-chromosomal DNA maintenance PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information: The operon is not expressed in the lab strain 168 due to lack of expression of DegQ resulting in inactivity of DegS and DegU PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed