Difference between revisions of "LytC"
(→Extended information on the protein) |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | |||
{{SubtiWiki regulon|[[SigD regulon]]}}, | {{SubtiWiki regulon|[[SigD regulon]]}}, | ||
{{SubtiWiki regulon|[[SlrR regulon]]}}, | {{SubtiWiki regulon|[[SlrR regulon]]}}, | ||
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===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| − | impaired in motility, the phenotype is suppressed by mutations in ''[[lonA]]'' or ''[[smiA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19542270 PubMed] | + | * impaired in motility, the phenotype is suppressed by mutations in ''[[lonA]]'' or ''[[smiA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19542270 PubMed] |
=== Database entries === | === Database entries === | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | |||
** [[YvrHb]]: transcription repression {{PubMed|16306698}} | ** [[YvrHb]]: transcription repression {{PubMed|16306698}} | ||
** [[SlrR]] (in complex with [[SinR]]: transcription repression {{PubMed|20351052}} | ** [[SlrR]] (in complex with [[SinR]]: transcription repression {{PubMed|20351052}} | ||
Revision as of 10:20, 30 October 2011
- Description: N-acetylmuramoyl-L-alanine amidase, required for flagellar function PubMed
| Gene name | lytC |
| Synonyms | cwlB |
| Essential | no |
| Product | N-acetylmuramoyl-L-alanine amidase
(EC 3.5.1.28) |
| Function | major autolysin, cell separation, wall turnover
lysis, motility and general cell lysis induced by sodium azide |
| MW, pI | 52 kDa, 10.108 |
| Gene length, protein length | 1488 bp, 496 aa |
| Immediate neighbours | tuaA, lytB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
cell wall degradation/ turnover, motility and chemotaxis
This gene is a member of the following regulons
SigD regulon, SlrR regulon, YvrHb regulon
The gene
Basic information
- Locus tag: BSU35620
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
- Protein family: N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- secreted (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q02114
- KEGG entry: [3]
- E.C. number: 3.5.1.28
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
