Difference between revisions of "YsnA"

From SubtiWiki
Jump to: navigation, search
Line 1: Line 1:
* '''Description:''' unspecific nucleoside diphosphate phosphohydrolase<br/><br/>
+
* '''Description:''' ITPase<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
Line 10: Line 10:
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unspecific nucleoside diphosphate phosphohydrolase
+
|style="background:#ABCDEF;" align="center"| '''Product''' || ITPase
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || purine and thiamine metabolism
+
|style="background:#ABCDEF;" align="center"|'''Function''' || purine metabolism
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/thiamin.html Thiamin]'''
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/thiamin.html Thiamin]'''
Line 34: Line 34:
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[poorly characterized/ putative enzymes]]}}
+
{{SubtiWiki category|[[nucleotide metabolism/ other]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
Line 86: Line 86:
 
=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' http://www.pdb.org/pdb/explore/explore.do?structureId=2MJP 2MJP (from ''Methanococcus jannaschii'') {{PubMed|10404228}}
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P94558 P94558]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P94558 P94558]
Line 127: Line 127:
  
 
=References=
 
=References=
 
+
<pubmed>10404228 11278832 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 13:59, 1 August 2011

  • Description: ITPase

Gene name ysnA
Synonyms
Essential no
Product ITPase
Function purine metabolism
Metabolic function and regulation of this protein in SubtiPathways:
Thiamin
MW, pI 21 kDa, 4.95
Gene length, protein length 594 bp, 198 aa
Immediate neighbours ysnB, rph
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YsnA context.gif
This image was kindly provided by SubtiList







Categories containing this gene/protein

nucleotide metabolism/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU28360

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: NTP + H2O = NDP + phosphate (according to Swiss-Prot)
  • Protein family: HAM1 NTPase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References