Difference between revisions of "FatR"
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* '''Operon:''' ''[[fatR]]-[[yrhJ]]'' {{PubMed|10917605}} | * '''Operon:''' ''[[fatR]]-[[yrhJ]]'' {{PubMed|10917605}} | ||
| − | * '''[[Sigma factor]]:''' [[SigM]] {{PubMed|12775685}} | + | * '''[[Sigma factor]]:''' [[SigM]] {{PubMed|12775685}}, [[SigW]] {{PubMed|12775685}}, [[SigX]] {{PubMed|12775685}} |
| + | |||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[FatR]]: transcription repression {{PubMed|11734890}} | ** [[FatR]]: transcription repression {{PubMed|11734890}} | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 13:52, 17 May 2011
| Gene name | fatR |
| Synonyms | yrhI, bscR |
| Essential | no |
| Product | transcriptional repressor of the fatR-yrhJ operon (TetR family) |
| Function | unknown |
| MW, pI | 22 kDa, 5.621 |
| Gene length, protein length | 582 bp, 194 aa |
| Immediate neighbours | yrhJ, yrhH |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
electron transport/ other, lipid metabolism/ other,lipid metabolism/ other, transcription factors and their control, cell envelope stress proteins (controlled by SigM, W, X, Y)
This gene is a member of the following regulons
FatR regulon, SigM regulon, SigW regulon, SigX regulon
The FatR regulon:
The gene
Basic information
- Locus tag: BSU27170
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O08335
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
