Difference between revisions of "CimH"
(→References) |
(→Expression and regulation) |
||
Line 98: | Line 98: | ||
=== Additional information=== | === Additional information=== | ||
− | =Expression and regulation= | + | =Expression and regulation: [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cimH_3979753_3981105_1 expression profile]= |
* '''Operon:''' | * '''Operon:''' | ||
Line 110: | Line 110: | ||
** [[CcpA]]: transcription repression {{PubMed|10666464}} | ** [[CcpA]]: transcription repression {{PubMed|10666464}} | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 15:42, 3 March 2011
- Description: transporter for citrate and malate (proton symport)
Gene name | cimH |
Synonyms | yxkJ |
Essential | no |
Product | transporter for citrate and malate (proton symport) |
Function | citrate and malate uptake |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 48 kDa, 6.554 |
Gene length, protein length | 1350 bp, 450 aa |
Immediate neighbours | cydA, yxkI |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
transporters/ other, utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38770
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: uptake of citrate and malate (symport with protons) PubMed
- Protein family: sodium:citrate (SCF) symporter family (according to Swiss-Prot) 2-hydroxycarboxylate transporter family
- Paralogous protein(s): MaeN
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P94363
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation: expression profile
- Operon:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Iwona Sobczak, Juke S Lolkema
The 2-hydroxycarboxylate transporter family: physiology, structure, and mechanism.
Microbiol Mol Biol Rev: 2005, 69(4);665-95
[PubMed:16339740]
[WorldCat.org]
[DOI]
(P p)
Original publications
Bastiaan P Krom, Juke S Lolkema
Conserved residues R420 and Q428 in a cytoplasmic loop of the citrate/malate transporter CimH of Bacillus subtilis are accessible from the external face of the membrane.
Biochemistry: 2003, 42(2);467-74
[PubMed:12525174]
[WorldCat.org]
[DOI]
(P p)
B P Krom, R Aardema, J S Lolkema
Bacillus subtilis YxkJ is a secondary transporter of the 2-hydroxycarboxylate transporter family that transports L-malate and citrate.
J Bacteriol: 2001, 183(20);5862-9
[PubMed:11566984]
[WorldCat.org]
[DOI]
(P p)
Y Miwa, A Nakata, A Ogiwara, M Yamamoto, Y Fujita
Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis.
Nucleic Acids Res: 2000, 28(5);1206-10
[PubMed:10666464]
[WorldCat.org]
[DOI]
(I p)