Difference between revisions of "Ung"

From SubtiWiki
Jump to: navigation, search
Line 52: Line 52:
  
 
=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
Line 79: Line 76:
  
 
* '''Interactions:'''
 
* '''Interactions:'''
 +
** [[SsbA]]-[[Ung]] {{PubMed|21170359}}
  
 
* '''Localization:''' cytoplasm (according to Swiss-Prot)
 
* '''Localization:''' cytoplasm (according to Swiss-Prot)
Line 126: Line 124:
 
=References=
 
=References=
 
<pubmed> 9353933 20693660 </pubmed>  
 
<pubmed> 9353933 20693660 </pubmed>  
 +
'''Additional publications:''' {{PubMed|21170359}}
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 10:42, 23 December 2010

  • Description: uracil-DNA glycosylase

Gene name ung
Synonyms ipa-57d, ywdG
Essential no
Product uracil-DNA glycosylase
Function DNA repair
MW, pI 25 kDa, 8.782
Gene length, protein length 675 bp, 225 aa
Immediate neighbours ywdH, ywdF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Ung context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU37970

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: uracil-DNA glycosylase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure: 3A7N (from Mycobacterium tuberculosis, 42% identity) PubMed
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Prem Singh Kaushal, Ramappa K Talawar, Umesh Varshney, M Vijayan
Structure of uracil-DNA glycosylase from Mycobacterium tuberculosis: insights into interactions with ligands.
Acta Crystallogr Sect F Struct Biol Cryst Commun: 2010, 66(Pt 8);887-92
[PubMed:20693660] [WorldCat.org] [DOI] (I p)

E Presecan, I Moszer, L Boursier, H Cruz Ramos, V de la Fuente, M-F Hullo, C Lelong, S Schleich, A Sekowska, B H Song, G Villani, F Kunst, A Danchin, P Glaser
The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees).
Microbiology (Reading): 1997, 143 ( Pt 10);3313-3328
[PubMed:9353933] [WorldCat.org] [DOI] (P p)

Additional publications: PubMed