Difference between revisions of "YwdI"

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(Expression and regulation)
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= Categories containing this gene/protein =
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{{SubtiWiki category|[[proteins of unknown function]]}}
 
=The protein=
 
=The protein=
  

Revision as of 23:58, 30 November 2010

  • Description: unknown

Gene name ywdI
Synonyms ipa-59d
Essential no
Product unknown
Function unknown
MW, pI 11 kDa, 4.869
Gene length, protein length 315 bp, 105 aa
Immediate neighbours ywdJ, ywdH
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwdI context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU37950

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

proteins of unknown function

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Ken-ichi Yoshida, Hirotake Yamaguchi, Masaki Kinehara, Yo-hei Ohki, Yoshiko Nakaura, Yasutaro Fujita
Identification of additional TnrA-regulated genes of Bacillus subtilis associated with a TnrA box.
Mol Microbiol: 2003, 49(1);157-65
[PubMed:12823818] [WorldCat.org] [DOI] (P p)