Difference between revisions of "YtrC"

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= Categories containing this gene/protein =
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{{SubtiWiki category|[[ABC transporters]]}},
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{{SubtiWiki category|[[utilization of specific carbon sources]]}},
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{{SubtiWiki category|[[cold stress proteins]]}},
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{{SubtiWiki category|[[membrane proteins]]}}
 
=The protein=
 
=The protein=
  

Revision as of 23:27, 30 November 2010

  • Description: acetoin ABC transporter (hydrophobic protein, probably channel protein)

Gene name ytrC
Synonyms
Essential no
Product acetoin ABC transporter
(hydrophobic protein, probably channel protein)
Function uptake of acetoin
Metabolic function and regulation of this protein in SubtiPathways:
Central C-metabolism
MW, pI 36 kDa, 7.744
Gene length, protein length 984 bp, 328 aa
Immediate neighbours ytrD, ytrB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YtrC context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU30440

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

Categories containing this gene/protein

ABC transporters, utilization of specific carbon sources, cold stress proteins, membrane proteins

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: ABC-5 integral membrane protein family (according to Swiss-Prot)
  • Paralogous protein(s): YtrD

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed early in the stationary phase PubMed
    • induced by cold shock (5-fold) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References