Difference between revisions of "YmfD"

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(Expression and regulation)
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=== Additional information===
 
=== Additional information===
  
 +
 +
= Categories containing this gene/protein =
 +
{{SubtiWiki category|[[transporters/ other]]}},
 +
{{SubtiWiki category|[[acquisition of iron]]}},
 +
{{SubtiWiki category|[[iron metabolism]]}},
 +
{{SubtiWiki category|[[membrane proteins]]}}
 
=The protein=
 
=The protein=
  

Revision as of 22:26, 30 November 2010

  • Description: exporter for the siderophore bacillibactin

Gene name ymfD
Synonyms
Essential no
Product bacillibactin exporter
Function iron acquisition
MW, pI 13 kDa, 10.069
Gene length, protein length 372 bp, 124 aa
Immediate neighbours ymfC, ymfF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YmfD context.gif
This image was kindly provided by SubtiList





The gene

Basic information

  • Locus tag: BSU16825

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

Categories containing this gene/protein

transporters/ other, acquisition of iron, iron metabolism, membrane proteins

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: major facilitator superfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Marcus Miethke, Sarah Schmidt, Mohamed A Marahiel
The major facilitator superfamily-type transporter YmfE and the multidrug-efflux activator Mta mediate bacillibactin secretion in Bacillus subtilis.
J Bacteriol: 2008, 190(15);5143-52
[PubMed:18502870] [WorldCat.org] [DOI] (I p)