Difference between revisions of "Ndh"
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | + | * '''Operon:''' ''[[yjlC]]-[[ndh]]'' {{PubMed|17015645}} | |
| − | * '''Operon:''' | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * '''Regulation:''' | + | * '''Regulation:''' |
| − | ** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}} | + | ** [[RelA]] dependent downregulation (Class I) during stringent response {{PubMed|11948165}} |
| − | ** induced under anaerobic conditions ([[Rex]]) | + | ** induced under anaerobic conditions ([[Rex]]) {{PubMed|17015645}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[Rex]]: transcription repression | + | ** [[Rex]]: transcription repression {{PubMed|17015645}} |
| − | |||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 121: | Line 119: | ||
=References= | =References= | ||
| − | <pubmed>17015645,, | + | <pubmed>17015645,,11948165,18763711, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:53, 12 June 2010
- Description: NADH dehydrogenase (Menaquinone 7 & no proton)
| Gene name | ndh |
| Synonyms | yjlD |
| Essential | no |
| Product | NADH dehydrogenase (Menaquinone 7 & no proton) |
| Function | respiration |
| MW, pI | 41 kDa, 6.289 |
| Gene length, protein length | 1176 bp, 392 aa |
| Immediate neighbours | yjlC, uxaC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU12290
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: NADH dehydrogenase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: membrane associated PubMed
Database entries
- Structure:
- UniProt: P80861
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Smita Gyan, Yoshihiko Shiohira, Ichiro Sato, Michio Takeuchi, Tsutomu Sato
Regulatory loop between redox sensing of the NADH/NAD(+) ratio by Rex (YdiH) and oxidation of NADH by NADH dehydrogenase Ndh in Bacillus subtilis.
J Bacteriol: 2006, 188(20);7062-71
[PubMed:17015645]
[WorldCat.org]
[DOI]
(P p)
Christine Eymann, Georg Homuth, Christian Scharf, Michael Hecker
Bacillus subtilis functional genomics: global characterization of the stringent response by proteome and transcriptome analysis.
J Bacteriol: 2002, 184(9);2500-20
[PubMed:11948165]
[WorldCat.org]
[DOI]
(P p)
