Difference between revisions of "IolC"

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(Expression and regulation)
(Database entries)
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=== Database entries ===
 
=== Database entries ===
  
* '''Structure:'''
+
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=2QCV 2QCV] (from ''Bacillus halodurans c-125 mutant'', 73% identity, 85% similarity)
  
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P42414 P42414]
 
* '''UniProt:''' [http://www.uniprot.org/uniprot/P42414 P42414]

Revision as of 13:59, 17 February 2010

  • Description: formation of 2-deoxy-5-keto-gluconic acid-6-phosphate (5th reaction)

Gene name iolC
Synonyms yxdC
Essential no
Product formation of 2-deoxy-5-keto-gluconic
acid-6-phosphate (5th reaction)
Function myo-inositol catabolism
Metabolic function and regulation of this protein in SubtiPathways:
Sugar catabolism
MW, pI 35 kDa, 4.782
Gene length, protein length 975 bp, 325 aa
Immediate neighbours iolD, iolB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
IolC context.gif
This image was kindly provided by SubtiList







The gene

Basic information

  • Locus tag: BSU39740

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + 5-dehydro-2-deoxy-D-gluconate = ADP + 6-phospho-5-dehydro-2-deoxy-D-gluconate (according to Swiss-Prot)
  • Protein family: carbohydrate kinase pfkB family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 2QCV (from Bacillus halodurans c-125 mutant, 73% identity, 85% similarity)
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References