Difference between revisions of "YwcC"

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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SlrA]] expression
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SlrA]] expression
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/biofilm.html Biofilm]'''
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 25 kDa, 8.466   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 25 kDa, 8.466   

Revision as of 13:59, 16 February 2010

  • Description: transcription repressor (TetR family), controls SlrA expression

Gene name ywcC
Synonyms ipa-33d
Essential no
Product transcription repressor (TetR family)
Function control of SlrA expression
Regulation of this protein in SubtiPathways:
Biofilm
MW, pI 25 kDa, 8.466
Gene length, protein length 669 bp, 223 aa
Immediate neighbours gtaC, slrA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwcC context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU38220

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Yunrong Chai, Roberto Kolter, Richard Losick
Paralogous antirepressors acting on the master regulator for biofilm formation in Bacillus subtilis.
Mol Microbiol: 2009, 74(4);876-87
[PubMed:19788541] [WorldCat.org] [DOI] (I p)

Kazuo Kobayashi
SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis.
Mol Microbiol: 2008, 69(6);1399-410
[PubMed:18647168] [WorldCat.org] [DOI] (I p)