Difference between revisions of "RapG"
(→Expression and regulation) |
(→Expression and regulation) |
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=Expression and regulation= | =Expression and regulation= | ||
+ | * '''Operon:''' ''[[rapG]]-[[phrG]]'' {{PubMed|12950930}} | ||
− | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|16553878}}, SigH {{PubMed|12950930}} | |
− | |||
− | * '''[[Sigma factor]]:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
** repressed by [[SinR]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ** repressed by [[SinR]] [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ||
− | ** repressed by [[RghR]] | + | ** repressed by [[RghR]] {{PubMed|16553878}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
** [[SinR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ** [[SinR]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/16430695 PubMed] | ||
− | ** [[RghR]]: transcription repression | + | ** [[RghR]]: transcription repression {{PubMed|16553878}} |
* '''Additional information:''' | * '''Additional information:''' |
Revision as of 20:24, 11 February 2010
- Description: response regulator aspartate phosphatase, controls DegU activity
Gene name | rapG |
Synonyms | yycM |
Essential | no |
Product | response regulator aspartate phosphatase |
Function | control of DegU activity |
MW, pI | 42 kDa, 4.807 |
Gene length, protein length | 1095 bp, 365 aa |
Immediate neighbours | yycN, phrG |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag: BSU40300
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Protein family: RAP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Localization:
Database entries
- Structure:
- UniProt: O32294
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor: SigA PubMed, SigH PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References