Difference between revisions of "YdjM"
| Line 92: | Line 92: | ||
* '''[[Sigma factor]]:''' | * '''[[Sigma factor]]:''' | ||
| − | * '''Regulation:''' activated by [[WalR]] [ | + | * '''Regulation:''' |
| + | ** activated by [[WalR]] {{PubMed|17581128}} | ||
| + | ** activated under conditions of phosphate starvation ([[PhoP]]) {{PubMed|20059685}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[WalR]]: transcription activation {{PubMed|17581128}} | ||
| + | ** [[PhoP]]: transcription activation {{PubMed|20059685}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 118: | Line 122: | ||
=References= | =References= | ||
| − | <pubmed>17581128,, </pubmed> | + | <pubmed>17581128, 20059685, </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 11:35, 12 January 2010
- Description: member of the WalR regulon
| Gene name | ydjM |
| Synonyms | yzvA |
| Essential | no |
| Product | unknown |
| Function | may be involved in cell wall metabolism (WalR regulon) |
| MW, pI | 13 kDa, 10.57 |
| Gene length, protein length | 369 bp, 123 aa |
| Immediate neighbours | bdhA, ydjN |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU06250
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P40775
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ydjM (according to DBTBS)
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Paola Bisicchia, David Noone, Efthimia Lioliou, Alistair Howell, Sarah Quigley, Thomas Jensen, Hanne Jarmer, Kevin M Devine
The essential YycFG two-component system controls cell wall metabolism in Bacillus subtilis.
Mol Microbiol: 2007, 65(1);180-200
[PubMed:17581128]
[WorldCat.org]
[DOI]
(P p)
