Difference between revisions of "CopA"

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(Expression and regulation)
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=Expression and regulation=
 
=Expression and regulation=
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* '''Operon:''' ''[[copZ]]-[[copA]]'' {{PubMed|12779235}}
  
* '''Operon:''' ''[[copZ]]-[[copA]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/12779235 PubMed]
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|12779235}}
 
+
* '''Regulation:'''  
* '''[[Sigma factor]]:''' [[SigA]] [http://www.ncbi.nlm.nih.gov/sites/entrez/12779235 PubMed]
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** induced by copper ([[CsoR]]) {{PubMed|18048925,12779235}}
 
 
* '''Regulation:''' induced by copper [http://www.ncbi.nlm.nih.gov/sites/entrez/12779235 PubMed]
 
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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** CsoR: transcription repression {{PubMed|18048925}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 08:41, 29 December 2009

  • Description: copper-transporting ATPase, resistance to copper

Gene name copA
Synonyms yvgX
Essential no
Product copper transporting ATPase
Function copper export
MW, pI 85 kDa, 5.484
Gene length, protein length 2409 bp, 803 aa
Immediate neighbours cadA, copZ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YvgX context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU33500

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + H2O + Cu1+(In) = ADP + phosphate + Cu1+(Out) (according to Swiss-Prot)
  • Protein family: Type IB subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions: CopA-CopZ, for the transfer of the Cu(I) cluster PubMed
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure: 2RML ( N-terminal soluble domain)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
    • CsoR: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

Your additional remarks

References