Difference between revisions of "YthP"

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=Expression and regulation=
 
=Expression and regulation=
 +
* '''Operon:''' ''[[ythP]]-[[ythQ]]'' {{PubMed|11866510}}
  
* '''Operon:'''  
+
* '''[[Sigma factor]]:''' [[SigW]] {{PubMed|11866510,12207695}}
  
* '''[[Sigma factor]]:'''
+
* '''Regulation:'''
 +
** expressed under conditions of cell wall stress ([[SigW]]) {{PubMed|11866510,12207695}}
  
* '''Regulation:'''
 
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
  
<pubmed>10092453,, </pubmed>
+
<pubmed>10092453,11866510,12207695, </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:06, 19 December 2009

  • Description: similar to ABC transporter (ATP-binding protein)

Gene name ythP
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 26 kDa, 5.265
Gene length, protein length 708 bp, 236 aa
Immediate neighbours ythQ, ytzE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YthP context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU30010

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed under conditions of cell wall stress (SigW) PubMed


  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Min Cao, Tao Wang, Rick Ye, John D Helmann
Antibiotics that inhibit cell wall biosynthesis induce expression of the Bacillus subtilis sigma(W) and sigma(M) regulons.
Mol Microbiol: 2002, 45(5);1267-76
[PubMed:12207695] [WorldCat.org] [DOI] (P p)

Min Cao, Phil A Kobel, Maud M Morshedi, Ming Fang Winston Wu, Chris Paddon, John D Helmann
Defining the Bacillus subtilis sigma(W) regulon: a comparative analysis of promoter consensus search, run-off transcription/macroarray analysis (ROMA), and transcriptional profiling approaches.
J Mol Biol: 2002, 316(3);443-57
[PubMed:11866510] [WorldCat.org] [DOI] (P p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)