Difference between revisions of "YraF"
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| − | * '''Description:''' similar to spore coat protein <br/><br/> | + | * '''Description:''' forespore-specific sporulation protein, similar to spore coat protein <br/><br/> |
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | |
| + | * '''Operon:''' ''[[yraG]]-[[yraF]]-[[adhB]]-[[yraE]]-[[yraD]]'' {{PubMed|16497325}} | ||
* '''[[Sigma factor]]:''' [[SigG]] {{PubMed|16497325}} | * '''[[Sigma factor]]:''' [[SigG]] {{PubMed|16497325}} | ||
| − | * '''Regulation:''' expressed during sporulation in the forespore ([[SigG]]) {{PubMed|16497325}} | + | * '''Regulation:''' |
| + | ** expressed during sporulation in the forespore ([[SigG]]) {{PubMed|16497325}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 117: | Line 119: | ||
=References= | =References= | ||
| − | + | <pubmed> 16497325</pubmed> | |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 20:17, 25 November 2009
- Description: forespore-specific sporulation protein, similar to spore coat protein
| Gene name | yraF |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| MW, pI | 13 kDa, 5.139 |
| Gene length, protein length | 366 bp, 122 aa |
| Immediate neighbours | yraG, adhB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU26960
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: cotF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O07949
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
