Difference between revisions of "RsfA"
| Line 1: | Line 1: | ||
| − | * '''Description:''' probable regulator of transcription of SigF-dependent genes <br/><br/> | + | * '''Description:''' probable regulator of transcription of [[SigF]]-dependent genes <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || regulator of SigF activity | + | |style="background:#ABCDEF;" align="center"| '''Product''' || regulator of [[SigF]] activity |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || control of expression of SigF-dependent genes | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of expression of [[SigF]]-dependent genes |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.13 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 5.13 | ||
| Line 90: | Line 90: | ||
* '''Operon:''' ''rsfA'' | * '''Operon:''' ''rsfA'' | ||
| − | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed| | + | * '''[[Sigma factor]]:''' [[SigF]] {{PubMed|16497325}} |
| − | * '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | + | * '''Regulation:''' |
| + | ** expressed early during sporulation in the forespore ([[SigF]]) {{PubMed|16497325,15699190}} | ||
| + | ** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
Revision as of 12:18, 1 November 2009
- Description: probable regulator of transcription of SigF-dependent genes
| Gene name | rsfA |
| Synonyms | ywfN, ipa-92r |
| Essential | no |
| Product | regulator of SigF activity |
| Function | control of expression of SigF-dependent genes |
| MW, pI | 29 kDa, 5.13 |
| Gene length, protein length | 774 bp, 258 aa |
| Immediate neighbours | ywzC, ywfM |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU37620
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: forespore (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P39650
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: rsfA
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325]
[WorldCat.org]
[DOI]
(P p)
Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147]
[WorldCat.org]
[DOI]
(P p)
L J Wu, J Errington
Identification and characterization of a new prespore-specific regulatory gene, rsfA, of Bacillus subtilis.
J Bacteriol: 2000, 182(2);418-24
[PubMed:10629188]
[WorldCat.org]
[DOI]
(P p)
