Difference between revisions of "DegR"
| Line 10: | Line 10: | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || positive effector of DegU-phosphate stability | + | |style="background:#ABCDEF;" align="center"| '''Product''' || positive effector of [[DegU]]-phosphate stability |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || control of DegU activity | + | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[DegU]] activity |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 5.158 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 6 kDa, 5.158 | ||
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[degR]]'' | + | * '''Operon:''' ''[[degR]]'' {{PubMed|3082853}} |
| − | * '''[[Sigma factor]]:''' [[SigD]] | + | * '''[[Sigma factor]]:''' [[SigD]] {{PubMed|8550420}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | <pubmed>9335269,1459944,9108277,3098734,8550420,, </pubmed> | + | <pubmed>9335269,1459944,9108277,3098734,8550420,3082853 , </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 20:01, 26 October 2009
- Description: regulation of degradative enzyme production
| Gene name | degR |
| Synonyms | prtR |
| Essential | no |
| Product | positive effector of DegU-phosphate stability |
| Function | control of DegU activity |
| MW, pI | 6 kDa, 5.158 |
| Gene length, protein length | 180 bp, 60 aa |
| Immediate neighbours | cspD, ypzA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU21940
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P68731
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
