Difference between revisions of "YngE"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1785 bp, 595 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1785 bp, 595 aa  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yngD]]'', ''[[yngF]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[nrnB]]'', ''[[yngF]]''
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13704&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13704&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
+
* '''Operon:''' ''[[yngJ]]-[[yngI]]-[[yngH]]-[[yngG]]-[[yngF]]-[[yngE]]'' {{PubMed|12662922}}
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}}
+
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
 +
** expressed during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190,12662922}}
  
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
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=References=
 
=References=
 
+
<pubmed>15699190,12662922 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 20:07, 18 October 2009

  • Description: propionyl-CoA carboxylase

Gene name yngE
Synonyms
Essential no
Product propionyl-CoA carboxylase
Function lipid metabolism
MW, pI 66 kDa, 8.365
Gene length, protein length 1785 bp, 595 aa
Immediate neighbours nrnB, yngF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YngE context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU18210

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YqjD

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during sporulation in the mother cell (SigE) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References