Difference between revisions of "GerR"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''gerR'' (according to [http://dbtbs.hgc.jp/COG/prom/gerR.html DBTBS]) |
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190}} | ||
| − | * '''Regulation:''' repressed by glucose (3.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | + | * '''Regulation:''' |
| + | ** expressed during sporulation in the mother cell ([[SigE]]) {{PubMed|15699190}} | ||
| + | ** repressed by glucose (3.2-fold) [http://www.ncbi.nlm.nih.gov/pubmed/12850135 PubMed] | ||
| + | ** repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 16:15, 10 October 2009
- Description: probably DNA-binding protein, regulates transcription of some spore coat genes
| Gene name | gerR |
| Synonyms | ylbO |
| Essential | no |
| Product | unknown |
| Function | spore coat formation and resistance of spores to lysozyme |
| MW, pI | 22 kDa, 7.109 |
| Gene length, protein length | 579 bp, 193 aa |
| Immediate neighbours | rpmF, ylbP |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU15090
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: O34549
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gerR (according to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
