Difference between revisions of "SlrA"
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| − | * '''Description:''' antagonist of | + | * '''Description:''' anti-repressor, antagonist of [[SinR]], involved in control of flagellar genes and eps and yqxM operons <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || no |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || antagonist of | + | |style="background:#ABCDEF;" align="center"| '''Product''' || antagonist of [[SinR]] |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation | + | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of biofilm formation |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || xx,x kDa, y.yy | ||
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* '''Cofactor(s):''' | * '''Cofactor(s):''' | ||
| − | * '''Effectors of protein activity:''' | + | * '''Effectors of protein activity:''' [[SlrR]] inhibits activity of [[SlrA]] (i. e. binding to [[SinR]]) {{PubMed|19788541}} |
| − | * '''Interactions:''' | + | * '''Interactions:''' [[SlrA]]-[[SinR]] {{PubMed|19788541}}, [[SlrA]]-[[SlrR]] {{PubMed|19788541}} |
* '''Localization:''' | * '''Localization:''' | ||
Revision as of 12:40, 1 October 2009
- Description: anti-repressor, antagonist of SinR, involved in control of flagellar genes and eps and yqxM operons
| Gene name | slrA |
| Synonyms | |
| Essential | no |
| Product | antagonist of SinR |
| Function | regulation of biofilm formation |
| MW, pI | xx,x kDa, y.yy |
| Gene length, protein length | 156 bp, 52 aa |
| Immediate neighbours | ywcC, ywcB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry:
Additional information
This gene was only recently identified. PubMed
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): SinI
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Localization:
Database entries
- Structure:
- UniProt: P0C8M5
- KEGG entry: no entry
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yunrong Chai, Roberto Kolter, Richard Losick
Paralogous antirepressors acting on the master regulator for biofilm formation in Bacillus subtilis.
Mol Microbiol: 2009, 74(4);876-87
[PubMed:19788541]
[WorldCat.org]
[DOI]
(I p)
Kazuo Kobayashi
SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis.
Mol Microbiol: 2008, 69(6);1399-410
[PubMed:18647168]
[WorldCat.org]
[DOI]
(I p)
