Difference between revisions of "AbnA"
| Line 80: | Line 80: | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1UV4 1UV4] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1UV4 1UV4] | ||
| − | * ''' | + | * '''UniProt:''' [http://www.uniprot.org/uniprot/P94522 P94522] |
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU28810] | * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU28810] | ||
Revision as of 14:02, 20 July 2009
- Description: endo-1,5-alpha-L-arabinosidase
| Gene name | abnA |
| Synonyms | |
| Essential | no |
| Product | endo-1,5-alpha-L-arabinosidase |
| Function | arabinan degradation |
| MW, pI | 34 kDa, 8.618 |
| Gene length, protein length | 939 bp, 313 aa |
| Immediate neighbours | araA, ysdC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU28810
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endohydrolysis of (1->5)-alpha-arabinofuranosidic linkages in (1->5)-arabinans (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 43 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: extracellular (signal peptide) PubMed
Database entries
- Structure: 1UV4
- UniProt: P94522
- KEGG entry: [3]
- E.C. number: 3.2.1.99
Additional information
Expression and regulation
- Operon:
- Additional information: the mRNA is very stable (half-life > 15 min) PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
