Difference between revisions of "YojM"

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* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1XTL 1XTL] {{PubMed|15897454}}
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1XTL 1XTL] {{PubMed|15897454}}
  
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O31851 O31851]
+
* '''UniProt:''' [http://www.uniprot.org/uniprot/O31851 O31851]
  
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU19400]
 
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU19400]

Revision as of 13:05, 20 July 2009

  • Description: superoxide dismutase

Gene name yojM
Synonyms
Essential no
Product superoxide dismutase
Function unknown
MW, pI 20 kDa, 5.636
Gene length, protein length 588 bp, 196 aa
Immediate neighbours yojN, cwlS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YojM context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU19400

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: alpha-ketoglutarate dehydrogenase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Lucia Banci, Ivano Bertini, Vito Calderone, Fiorenza Cramaro, Rebecca Del Conte, Adele Fantoni, Stefano Mangani, Alessandro Quattrone, Maria Silvia Viezzoli
A prokaryotic superoxide dismutase paralog lacking two Cu ligands: from largely unstructured in solution to ordered in the crystal.
Proc Natl Acad Sci U S A: 2005, 102(21);7541-6
[PubMed:15897454] [WorldCat.org] [DOI] (P p)