Difference between revisions of "YrvJ"

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Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O32041 O32041]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/O32041 O32041]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU27580]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU27580]
  
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.5.1.28 3.5.1.28]
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/3.5.1.28 3.5.1.28]

Revision as of 09:20, 25 June 2009

  • Description: similar to N-acetylmuramoyl-L-alanine amidase

Gene name yrvJ
Synonyms
Essential no
Product peptidoglycan hydrolase
Function cell wall metabolism
MW, pI 55 kDa, 5.192
Gene length, protein length 1554 bp, 518 aa
Immediate neighbours yrzK, yrvI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YrvJ context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU27580

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
  • Protein family: N-acetylmuramoyl-L-alanine amidase 3 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References