Difference between revisions of "Xis"

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* '''Description:''' write here <br/><br/>
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* '''Description:''' excisionase<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' ||  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' ||  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional regulator
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|style="background:#ABCDEF;" align="center"| '''Product''' || excisionase
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the levansucrase gene (''[[sacB]]'')
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|style="background:#ABCDEF;" align="center"|'''Function''' || excision of conjugative transposon
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.64   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.64   
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=== Basic information/ Evolution ===
 
=== Basic information/ Evolution ===
  
* '''Catalyzed reaction/ biological activity:'''  
+
* '''Catalyzed reaction/ biological activity:''' excision of conjugative transposon [http://www.ncbi.nlm.nih.gov/sites/entrez/18005101 PubMed]
  
 
* '''Protein family:'''
 
* '''Protein family:'''
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=== Additional information===
 
=== Additional information===
 +
 +
Was reported to be involved in the regulation of the levansucrase gene (''[[sacB]]'') [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
 +
  
 
=Expression and regulation=
 
=Expression and regulation=

Revision as of 09:35, 4 February 2009

  • Description: excisionase

Gene name xis
Synonyms ydzC, sacV
Essential
Product excisionase
Function excision of conjugative transposon
MW, pI 7 kDa, 9.64
Gene length, protein length 192 bp, 64 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
SacV context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: excision of conjugative transposon PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Was reported to be involved in the regulation of the levansucrase gene (sacB) PubMed


Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed