Difference between revisions of "Gdh"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU03930
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 80: Line 80:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P12310 P12310]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P12310 P12310]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU03930 BSU03930]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU03930]
  
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.1.1.47 1.1.1.47]
 
* '''E.C. number:''' [http://www.expasy.org/enzyme/1.1.1.47 1.1.1.47]

Revision as of 09:30, 3 June 2009

  • Description: glucose 1-dehydrogenase (NAD)

Gene name gdh
Synonyms
Essential no
Product glucose 1-dehydrogenase (NAD)
Function germination
MW, pI 27 kDa, 5.082
Gene length, protein length 783 bp, 261 aa
Immediate neighbours glcU, ycnI
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Gdh context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU03930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Beta-D-glucose + NAD(P)+ = D-glucono-1,5-lactone + NAD(P)H (according to Swiss-Prot)
  • Protein family: short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed