Difference between revisions of "SigX"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsiX]]'', ''[[resE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rsiX]]'', ''[[resE]]'' | ||
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| − | |style="background:#FAF8CC;" align="center"|'''[http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB14242]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' |
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|colspan="2" | '''Genetic context''' <br/> [[Image:sigX_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:sigX_context.gif]] | ||
Revision as of 23:35, 16 April 2009
- Description: RNA polymerase ECF-type sigma factor SigX
| Gene name | sigX |
| Synonyms | ypuM |
| Essential | no |
| Product | RNA polymerase ECF-type sigma factor SigX |
| Function | cell surface properties |
| MW, pI | 23 kDa, 6.086 |
| Gene length, protein length | 582 bp, 194 aa |
| Immediate neighbours | rsiX, resE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Genes controlled by SigX
pbpX, csbB, abh, dltA-dltB-dltC-dltD-dltE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Huang X, Helmann JD. (1998) Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search. J Mol Biol. 279: 165-173. PubMed
- Serizawa M, Kodama K, Yamamoto H, Kobayashi K, Ogasawara N, Sekiguchi J. (2005) Functional analysis of the YvrGHb two-component system of Bacillus subtilis: identification of the regulated genes by DNA microarray and northern blot analyses. Biosci. Biotechnol. Biochem. 69: 2155-2169. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
