Difference between revisions of "OxdC"
| Line 91: | Line 91: | ||
* '''Operon:''' ''[[oxdC]]-[[yvrL]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | * '''Operon:''' ''[[oxdC]]-[[yvrL]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | ||
| − | * '''Sigma factor:''' [[YvrI]]-[[YvrH]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | + | * '''[[Sigma factor]]:''' [[YvrI]]-[[YvrH]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] |
* '''Regulation:''' induced by acidic growth conditions [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | * '''Regulation:''' induced by acidic growth conditions [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | # MacLellan et al. (2009) The YvrI alternative sigma factor is essential for acid stress induction of oxalate decarboxylase in ''Bacillus subtilis''. ''J. Bacteriol.'' '''191:''' 931-939. [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] | + | # MacLellan et al. (2009) The YvrI alternative [[sigma factor]] is essential for acid stress induction of oxalate decarboxylase in ''Bacillus subtilis''. ''J. Bacteriol.'' '''191:''' 931-939. [http://www.ncbi.nlm.nih.gov/sites/entrez/19047353 PubMed] |
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | ||
Revision as of 17:00, 7 April 2009
- Description: oxalate decarboxylase
| Gene name | oxdC |
| Synonyms | yvrK |
| Essential | no |
| Product | oxalate decarboxylase |
| Function | unknown |
| MW, pI | 43 kDa, 5.101 |
| Gene length, protein length | 1155 bp, 385 aa |
| Immediate neighbours | yvrJ, yvrL |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): OxdD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation: induced by acidic growth conditions PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
John Helmann, Cornell University, USA Homepage
Your additional remarks
References
- MacLellan et al. (2009) The YvrI alternative sigma factor is essential for acid stress induction of oxalate decarboxylase in Bacillus subtilis. J. Bacteriol. 191: 931-939. PubMed
- Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
