Difference between revisions of "Sandbox"

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* '''Description:''' tRNA-Ile<br/><br/>
+
* '''Description:''' tRNA-Ala<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''trnA-Ile''
+
|''trnA-Ala''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transfer RNA-Ile
+
|style="background:#ABCDEF;" align="center"| '''Product''' || transfer RNA-Ala
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || translation  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || translation  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  77 bp
+
|style="background:#ABCDEF;" align="center"| '''Gene length''' ||  76 bp
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrnA-16S]]'', ''[[trnA-Ala]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trnA-Ile]]'', ''[[rrnA-23S]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/trnA-Ile_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
+
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/trnA-Ala_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
 
|-
 
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:trnA-Ile_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:trnA-Ala_context.gif]]
 
|-
 
|-
 
|}
 
|}
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* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rrnA-16S-trnA-Ile-trnA-Ala-rrnA-23S-rrnA-5S.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/rrnA-16S-trnA-Ile-trnA-Ala-rrnA-23S-rrnA-5S.html]
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00012]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00013]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 11:54, 26 February 2009

  • Description: tRNA-Ala

Gene name trnA-Ala
Synonyms
Essential no
Product transfer RNA-Ala
Function translation
Gene length 76 bp
Immediate neighbours trnA-Ile, rrnA-23S
Gene sequence (+200bp)
Genetic context
TrnA-Ala context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]
  • Structure:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/RNA

Your additional remarks

References

  1. Ogasawara et al. (1983) Structure and organization of rRNA operons in the region of the replication origin of the Bacillus subtilis chromosome.Nucl. Acids Res. 11: 6301-6318. PubMed
  2. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed