yocR

168

similar to sodium-dependent transporter

Locus: BSU_19340

Molecular weight: 48.17 kDa

Isoelectric point: 9.59

Protein length: 445 aa

Gene length: 1338 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: yocR

Genomic Context

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List of homologs in different organisms, belongs to COG0733 (Galperin et al., 2021)

Gene

Coordinates: 2,104,934 → 2,106,271

The protein

Protein family

• sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family (with YhdH, according to UniProt)

Structure

• 4US4 (PDB) (the protein from B. halodurans, 45% identity, 77% similarity) PubMed
• O34383 (AlphaFold)

Paralogous protein(s)

• YhdH

Localization

• membrane associated PubMed

Expression and Regulation

Operons

• Genes: yocR

  Description: PubMed

Biological materials

Mutant

• MGNA-B419 (yocR::erm), available at the NBRP B. subtilis, Japan
• BKE19340 (ΔyocR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACCGTATCACTCCTATTTG,  downstream forward: _UP4_TAACACACGAAGCCCCCGAG
• BKK19340 (ΔyocR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACCGTATCACTCCTATTTG,  downstream forward: _UP4_TAACACACGAAGCCCCCGAG

References

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