Difference between revisions of "NagR"
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* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35030&redirect=T BSU35030] | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU35030&redirect=T BSU35030] | ||
| − | * '''Structure:''' [http://www.rcsb.org/pdb/search/structidSearch.do?structureId=2WV0 2WVO] {{PubMed|20047956}} | + | * '''Structure:''' |
| + | ** [http://www.rcsb.org/pdb/search/structidSearch.do?structureId=2WV0 2WVO] {{PubMed|20047956}} | ||
| + | ** [http://www.rcsb.org/pdb/explore/explore.do?structureId=4wwc 4WWC] (complex with palindromic operator DNA) {{PubMed|25564531}} | ||
* '''UniProt:''' [http://www.uniprot.org/uniprot/O34817 O34817] | * '''UniProt:''' [http://www.uniprot.org/uniprot/O34817 O34817] | ||
Revision as of 16:41, 16 February 2015
- Description: transcriptional regulator (GntR family)
| Gene name | nagR |
| Synonyms | yvoA |
| Essential | no |
| Product | transcriptional regulator (GntR family) |
| Function | probably regulator of the putative nagA-nagB-yvoA operon |
| Gene expression levels in SubtiExpress: nagR | |
| Metabolic function and regulation of this protein in SubtiPathways: nagR | |
| MW, pI | 27 kDa, 6.768 |
| Gene length, protein length | 729 bp, 243 aa |
| Immediate neighbours | nagB, yvnB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of specific carbon sources, transcription factors and their control
This gene is a member of the following regulons
The NagR regulon:
The gene
Basic information
- Locus tag: BSU35030
Phenotypes of a mutant
Database entries
- BsubCyc: BSU35030
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription repression of nagP and of the putative nagA-nagB-nagR operon in the absence of N-acetylglycosamine PubMed, weak repression of yflG PubMed
- Protein family: GntR family of transcription factors
- Paralogous protein(s):
Extended information on the protein
- Kinetic information: K(D) for N-acetylglucosamine-6-phosphate: 1 mM PubMed
- Modification:
- Effectors of protein activity:
- N-acetylglucosamine-6-phosphate and glucosamine-6-phosphate act as the molecular inducers PubMed
Database entries
- BsubCyc: BSU35030
- UniProt: O34817
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
