Difference between revisions of "Rtp"
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
+ | ** binds to nine termination sites spanning ∼430 kb of the replication terminus region {{PubMed|9642188}} | ||
− | * '''Protein family:''' | + | * '''Protein family:''' |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
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=References= | =References= | ||
− | <pubmed>7746150,10209741, 19820088, 2498294 2115089 1784827 7934839 </pubmed> | + | <pubmed>7746150,10209741, 19820088, 2498294 2115089 1784827 7934839 9642188 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 11:29, 30 July 2014
- Description: replication terminator protein
Gene name | rtp |
Synonyms | |
Essential | no |
Product | replication terminator protein |
Function | replication termination |
Gene expression levels in SubtiExpress: rtp | |
MW, pI | 14 kDa, 9.778 |
Gene length, protein length | 366 bp, 122 aa |
Immediate neighbours | proH, yoxD |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU18490
Phenotypes of a mutant
Database entries
- BsubCyc: BSU18490
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- binds to nine termination sites spanning ∼430 kb of the replication terminus region PubMed
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU18490
- UniProt: P68732
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
- number of protein molecules per cell (complex medium with amino acids, without glucose): 50 PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Qiaojuan Shi, Jose C Huguet-Tapia, Joseph E Peters
Tn917 targets the region where DNA replication terminates in Bacillus subtilis, highlighting a difference in chromosome processing in the firmicutes.
J Bacteriol: 2009, 191(24);7623-7
[PubMed:19820088]
[WorldCat.org]
[DOI]
(I p)
S Autret, A Levine, F Vannier, Y Fujita, S J Séror
The replication checkpoint control in Bacillus subtilis: identification of a novel RTP-binding sequence essential for the replication fork arrest after induction of the stringent response.
Mol Microbiol: 1999, 31(6);1665-79
[PubMed:10209741]
[WorldCat.org]
[DOI]
(P p)
A A Griffiths, P A Andersen, R G Wake
Replication terminator protein-based replication fork-arrest systems in various Bacillus species.
J Bacteriol: 1998, 180(13);3360-7
[PubMed:9642188]
[WorldCat.org]
[DOI]
(P p)
A Levine, S Autret, S J Séror
A checkpoint involving RTP, the replication terminator protein, arrests replication downstream of the origin during the Stringent Response in Bacillus subtilis.
Mol Microbiol: 1995, 15(2);287-95
[PubMed:7746150]
[WorldCat.org]
[DOI]
(P p)
D B Langley, M T Smith, P J Lewis, R G Wake
Protein-nucleoside contacts in the interaction between the replication terminator protein of Bacillus subtilis and the DNA terminator.
Mol Microbiol: 1993, 10(4);771-9
[PubMed:7934839]
[WorldCat.org]
[DOI]
(P p)
P J Lewis, R G Wake
Termination of chromosome replication in Bacillus subtilis.
Res Microbiol: 1991, 142(7-8);893-900
[PubMed:1784827]
[WorldCat.org]
[DOI]
(P p)
P J Lewis, G B Ralston, R I Christopherson, R G Wake
Identification of the replication terminator protein binding sites in the terminus region of the Bacillus subtilis chromosome and stoichiometry of the binding.
J Mol Biol: 1990, 214(1);73-84
[PubMed:2115089]
[WorldCat.org]
[DOI]
(P p)
P J Lewis, M T Smith, R G Wake
A protein involved in termination of chromosome replication in Bacillus subtilis binds specifically to the terC site.
J Bacteriol: 1989, 171(6);3564-7
[PubMed:2498294]
[WorldCat.org]
[DOI]
(P p)