Difference between revisions of "RodZ"

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[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 09:06, 17 December 2014

  • Description: required for cell shape determination

Gene name rodZ
Synonyms ymfM
Essential may be essential PubMed
Product morphogenic protein
Function required for cell shape determination
Gene expression levels in SubtiExpress: rodZ
Interactions involving this protein in SubtInteract: RodZ
MW, pI 23 kDa, 4.679
Gene length, protein length 639 bp, 213 aa
Immediate neighbours ymfK/2, pgsA
Sequences Protein DNA DNA_with_flanks
Genetic context
YmfM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RodZ expression.png















Categories containing this gene/protein

cell shape, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU16910

Phenotypes of a mutant

  • may be essential PubMed
  • depletion results in the formation of shorter and rounder cells PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

  • overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) PubMed
  • RodZ is destabilized in a mreB mutant PubMed

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 73 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 497 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Adriano Henriques, Lisbon, Portugal homepage

Your additional remarks

References