Difference between revisions of "MtnU"

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* '''Description:''' unknown <br/><br/>
+
* '''Description:''' omega-amidase <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
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|style="background:#ABCDEF;" align="center"| '''Product''' || omega-amidase
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
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|style="background:#ABCDEF;" align="center"|'''Function''' || methionine salvage
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13570 mtnU]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13570 mtnU]
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<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
 
<br/><br/><br/><br/>
<br/><br/><br/><br/>
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<br/><br/>
<br/><br/><br/><br/>
 
 
 
 
 
<br/><br/><br/><br/><br/><br/>
 
  
 
= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[proteins of unknown function]]}}
+
{{SubtiWiki category|[[biosynthesis/ acquisition of amino acids]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
 +
* reduced growth with 5-methylthioribose as single sulfur source {{PubMed|24837359}}
  
 
=== Database entries ===
 
=== Database entries ===
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
 +
** 2-ketoglutaramate + H<sub>2</sub>O ---> 2-oxoglutarate + NH<sub>3</sub> {{PubMed|24837359}}
  
 
* '''Protein family:''' CN hydrolase domain (according to Swiss-Prot)
 
* '''Protein family:''' CN hydrolase domain (according to Swiss-Prot)
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=References=
 
=References=
<pubmed> 15102328 12022921 11545674 </pubmed>
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<pubmed> 15102328 12022921 11545674 24837359 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 08:55, 21 May 2014

  • Description: omega-amidase

Gene name mtnU
Synonyms ykrU
Essential no
Product omega-amidase
Function methionine salvage
Gene expression levels in SubtiExpress: mtnU
Metabolic function and regulation of this protein in SubtiPathways:
mtnU
MW, pI 29 kDa, 5.099
Gene length, protein length 777 bp, 259 aa
Immediate neighbours mtnK, mtnE
Sequences Protein DNA DNA_with_flanks
Genetic context
YkrU context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
MtnU expression.png















Categories containing this gene/protein

biosynthesis/ acquisition of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU13570

Phenotypes of a mutant

  • reduced growth with 5-methylthioribose as single sulfur source PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

the E.coli homolog: yafV

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • 2-ketoglutaramate + H2O ---> 2-oxoglutarate + NH3 PubMed
  • Protein family: CN hydrolase domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 333 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 739 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References