Difference between revisions of "YciB"

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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 582 bp, 194 aa  
 
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 582 bp, 194 aa  
 
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yciA]]'', ''[[yczL]]''
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[folE2]]'', ''[[yczL]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03350 DNA_with_flanks]
 
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03350 DNA_with_flanks]
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=== Additional information===
 
=== Additional information===
 
 
  
  
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''[[yciA]]-[[yciB]]-[[yciC]]'' {{PubMed|9811636}}  
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* '''Operon:''' ''[[folE2]]-[[yciB]]-[[yciC]]'' {{PubMed|9811636}}  
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yciB_365170_365754_1 yciB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yciB_365170_365754_1 yciB] {{PubMed|22383849}}

Revision as of 15:50, 6 February 2015

  • Description: zinc transporter

Gene name yciB
Synonyms
Essential no
Product zinc transporter
Function zinc uptake
Gene expression levels in SubtiExpress: yciB
Metabolic function and regulation of this protein in SubtiPathways:
yciB
MW, pI 21 kDa, 6.18
Gene length, protein length 582 bp, 194 aa
Immediate neighbours folE2, yczL
Sequences Protein DNA DNA_with_flanks
Genetic context
YciB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YciB expression.png















Categories containing this gene/protein

transporters/ other, trace metal homeostasis (Cu, Zn, Ni, Mn, Mo), membrane proteins

This gene is a member of the following regulons

Zur regulon

The gene

Basic information

  • Locus tag: BSU03350

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
    • Zur: transcription repression in the presence of zinc PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References