RplF

• Description: ribosomal protein
  
  

Gene name	rplF
Synonyms
Essential	yes PubMed
Product	ribosomal protein L6 (BL8)
Function	translation
Gene expression levels in SubtiExpress: rplF
Interactions involving this protein in SubtInteract: RplF
MW, pI	19 kDa, 9.916
Gene length, protein length	537 bp, 179 aa
Immediate neighbours	rpsH, rplR
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

translation, essential genes, universally conserved proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

• Locus tag: BSU01310

Phenotypes of a mutant

essential PubMed

Database entries

• BsubCyc: BSU01310

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: ribosomal protein L6P family (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:
  • YsxC-RplF PubMed

• Localization:

Database entries

• BsubCyc: BSU01310

• Structure: 1RL6 (Geobacillus stearothermophilus), 2R6A (Geobacillus stearothermophilus), 2R6C, 2R6D, 2R6E

• UniProt: P46898

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon: rpsJ-rplC-rplD-rplW-rplB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ-rplN-rplX-rplE-rpsN-rpsH-rplF-rplR-rpsE-rpmD-rplO PubMed

• Expression browser: rplF PubMed

• Sigma factor:
  • SigA two promoters, about 140bp and 200bp upstream of the start codon PubMed

• Regulation:
  • RelA dependent downregulation (Class I) during stringent response PubMed

• Regulatory mechanism:

• Additional information:
  • number of protein molecules per cell (minimal medium with glucose and ammonium): 2870 PubMed
  • number of protein molecules per cell (complex medium with amino acids, without glucose): 8119 PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody: