Difference between revisions of "RplB"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU01190&redirect=T BSU01190]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU01190&redirect=T BSU01190]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1RL2 1RL2] (L2 RNA-binding domain, Geobacillus stearothermophilus)
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1RL2 1RL2] (L2 RNA-binding domain, Geobacillus stearothermophilus)

Revision as of 12:49, 2 April 2014

Gene name rplB
Synonyms
Essential yes PubMed
Product ribosomal protein L2 (BL2)
Function translation
Gene expression levels in SubtiExpress: rplB
Interactions involving this protein in SubtInteract: RplB
MW, pI 30 kDa, 11.013
Gene length, protein length 831 bp, 277 aa
Immediate neighbours rplW, rpsS
Sequences Protein DNA DNA_with_flanks
Genetic context
RplB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplB expression.png















Categories containing this gene/protein

translation, essential genes, universally conserved proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01190

Phenotypes of a mutant

  • essential PubMed
  • a H142L mutation results in a temperature-sensitive phenotype and is acompanied by growth and sporulation defects, the mutation can be suppressed by increased expression of yaaA PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 1RL2 (L2 RNA-binding domain, Geobacillus stearothermophilus)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References