Difference between revisions of "PheS"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28640&redirect=T BSU28640] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pheST.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/pheST.html] | ||
| Line 95: | Line 96: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28640&redirect=T BSU28640] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1PYS 1PYS] (from ''Thermus thermophilus hb8 mutant'', 37% identity, 56% similarity) {{PubMed|7664121}} | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1PYS 1PYS] (from ''Thermus thermophilus hb8 mutant'', 37% identity, 56% similarity) {{PubMed|7664121}} | ||
Revision as of 14:27, 2 April 2014
- Description: phenylalanyl-tRNA synthetase (alpha subunit), universally conserved protein
| Gene name | pheS |
| Synonyms | |
| Essential | yes PubMed |
| Product | phenylalanyl-tRNA synthetase (alpha subunit) |
| Function | translation |
| Gene expression levels in SubtiExpress: pheS | |
| Interactions involving this protein in SubtInteract: PheS | |
| Metabolic function and regulation of this protein in SubtiPathways: pheS | |
| MW, pI | 38 kDa, 5.083 |
| Gene length, protein length | 1032 bp, 344 aa |
| Immediate neighbours | pheT, ysgA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
translation, essential genes, universally conserved proteins, most abundant proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU28640
Phenotypes of a mutant
essential PubMed
Database entries
- BsubCyc: BSU28640
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) (according to Swiss-Prot)
- Protein family: Phe-tRNA synthetase alpha chain type 1 subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- BsubCyc: BSU28640
- UniProt: P17921
- KEGG entry: [3]
- E.C. number: 6.1.1.20
Additional information
Expression and regulation
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
- belongs to the 100 most abundant proteins PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Ana Gutiérrez-Preciado, Tina M Henkin, Frank J Grundy, Charles Yanofsky, Enrique Merino
Biochemical features and functional implications of the RNA-based T-box regulatory mechanism.
Microbiol Mol Biol Rev: 2009, 73(1);36-61
[PubMed:19258532]
[WorldCat.org]
[DOI]
(I p)
Christine Eymann, Annette Dreisbach, Dirk Albrecht, Jörg Bernhardt, Dörte Becher, Sandy Gentner, Le Thi Tam, Knut Büttner, Gerrit Buurman, Christian Scharf, Simone Venz, Uwe Völker, Michael Hecker
A comprehensive proteome map of growing Bacillus subtilis cells.
Proteomics: 2004, 4(10);2849-76
[PubMed:15378759]
[WorldCat.org]
[DOI]
(P p)
A A Brakhage, M Wozny, H Putzer
Structure and nucleotide sequence of the Bacillus subtilis phenylalanyl-tRNA synthetase genes.
Biochimie: 1990, 72(10);725-34
[PubMed:2127701]
[WorldCat.org]
[DOI]
(P p)
