Difference between revisions of "GltC"
(→References) |
(→Extended information on the protein) |
||
Line 42: | Line 42: | ||
* '''Cofactor(s):''' | * '''Cofactor(s):''' | ||
− | * '''Effectors of protein activity:''' 2-oxoglutarate | + | * '''Effectors of protein activity:''' 2-oxoglutarate [http://www.ncbi.nlm.nih.gov/sites/entrez/17134717 PubMed] |
* '''Interactions:''' | * '''Interactions:''' | ||
− | ** GltC-[[RocG]], This interaction takes place in the presence of glutamate. It prevents the transcription activation of the ''gltAB'' operon. Note that [[RocG]] expression is strongly regulated. | + | ** GltC-[[RocG]], This interaction takes place in the presence of glutamate. It prevents the transcription activation of the ''gltAB'' operon. Note that [[RocG]] expression is strongly regulated. |
* '''Localization:''' | * '''Localization:''' |
Revision as of 14:58, 15 December 2008
- Synonyms:
- Description: Transcriptional activator of the gltAB operon. Activates expression of the operon in the absence of arginine.
Contents
The gene
Basic information
- Coordinates:
- Gene length:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry:[2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: transcription activation of the gltAB operon PubMed
- Protein family: LysR-type transcription regulator PubMed
- Paralogous protein(s): none, but there are 19 members of the LysR family in B. subtilis
Extended information on the protein
- Kinetic information:
- Domains: DNA-binding helix-turn-helix motif: AA 18 ... 37
- Modification:
- Cofactor(s):
- Effectors of protein activity: 2-oxoglutarate PubMed
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry: P20668
- KEGG entry: KEGG
Additional information
Expression and regulation
- Operon: gltC
- Sigma factor: SigA
- Regulation: autoregulation by GltC
- Regulatory mechanism: autorepression
- Database entries: DBTBS
- Additional information:
Biological materials
- Mutant: GP344 (erm), GP738 (spc) (available in Stülke lab)
- Expression vector: pGP903 (N-terminal His-tag) (available in Stülke lab)
- lacZ fusion:
- GFP fusion:
- Antibody: available in Stülke lab
Labs working on this gene/protein
Linc Sonenshein, Tufts University, Boston, MA, USA [3]
Jörg Stülke, University of Göttingen, Germany [4]
Your additional remarks
References
- Belitsky, B. R., and Sonenshein, A. L. (1995) Mutations in GltC that increase Bacillus subtilis gltA expression. J Bacteriol 177: 5696-5700.PubMed
- Belitsky, B. R., and Sonenshein, A. L. (2004) Modulation of activity of Bacillus subtilis regulatory proteins GltC and TnrA by glutamate dehydrogenase. J Bacteriol 186: 3399-3407.PubMed
- Bohannon, D. E., and Sonenshein, A. L. (1989) Positive regulation of glutamate biosynthesis in Bacillus subtilis. J Bacteriol 171: 4718-4727.PubMed
- Commichau, F. M., Wacker, I., Schleider, J., Blencke, H.-M., Reif, I., Tripal, P., and Stülke, J. (2007) Characterization of Bacillus subtilis mutants with carbon source-independent glutamate biosynthesis. J Mol Microbiol Biotechnol 12: 106-113. PubMed
- Commichau, F. M., Herzberg, C., Tripal, P., Valerius, O., and Stülke, J. (2007) A regulatory protein-protein interaction governs glutamate biosynthesis in Bacillus subtilis: The glutamate dehydrogenase RocG moonlights in controlling the transcription factor GltC. Mol Microbiol 65: 642-654. PubMed
- Picossi, S., Belitsky, B. R., and Sonenshein, A. L. (2007) Molecular mechanism of the regulation of Bacillus subtilis gltAB expression by GltC. J Mol Biol 365: 1298-1313. PubMed
- Wacker, I., Ludwig, H., Reif, I., Blencke, H. M., Detsch, C., and Stülke, J. (2003) The regulatory link between carbon and nitrogen metabolism in Bacillus subtilis: regulation of the gltAB operon by the catabolite control protein CcpA. Microbiology 149: 3001-3009.PubMed