Difference between revisions of "SodA"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25020&redirect=T BSU25020] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU25020&redirect=T BSU25020] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2RCV 2RCV] | * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2RCV 2RCV] | ||
Revision as of 14:14, 2 April 2014
- Description: superoxide dismutase, general stress protein, important for survival of ethanol and paraquat stresses and at low temperatures
| Gene name | sodA |
| Synonyms | yqgD |
| Essential | no |
| Product | superoxide dismutase |
| Function | detoxification of oxygen radicals |
| Gene expression levels in SubtiExpress: sodA | |
| MW, pI | 22 kDa, 5.203 |
| Gene length, protein length | 606 bp, 202 aa |
| Immediate neighbours | yqgE, yqgC |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress, membrane proteins, phosphoproteins, most abundant proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25020
Phenotypes of a mutant
Database entries
- BsubCyc: BSU25020
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 superoxide + 2 H+ = O2 + H2O2 (according to Swiss-Prot)
- Protein family: iron/manganese superoxide dismutase family (according to Swiss-Prot)
- Paralogous protein(s): SodF
Extended information on the protein
- Kinetic information:
- Modification: phosphorylation on Thr-34 AND Thr-70 PubMed
- Cofactors: manganese
- Effectors of protein activity:
- Localization: cytoplasm PubMed
Database entries
- BsubCyc: BSU25020
- Structure: 2RCV
- UniProt: P54375
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulatory mechanism:
- Additional information:
- The mRNA has a long 5' leader region. This may indicate RNA-based regulation PubMed
- belongs to the 100 most abundant proteins PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
