Difference between revisions of "YdeA"

From SubtiWiki
Jump to: navigation, search
Line 52: Line 52:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU05110&redirect=T BSU05110]
  
 
* '''DBTBS entry:''' no entry
 
* '''DBTBS entry:''' no entry
Line 87: Line 88:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU05110&redirect=T BSU05110]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3F5D 3F5D]
 
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=3F5D 3F5D]

Revision as of 13:03, 2 April 2014

  • Description: glyoxalase III-like enzyme

Gene name ydeA
Synonyms
Essential no
Product glyoxalase III-like enzyme
Function detoxification of methylglyoxal
Gene expression levels in SubtiExpress: ydeA
MW, pI 22 kDa, 5.644
Gene length, protein length 591 bp, 197 aa
Immediate neighbours ydzN, cspC
Sequences Protein DNA DNA_with_flanks
Genetic context
YdeA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdeA expression.png















Categories containing this gene/protein

resistance against oxidative and electrophile stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU05110

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • methylglyoxal --> D-lactate PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References