Difference between revisions of "SasB"

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(Basic information/ Evolution)
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* '''Protein family:'''
 
* '''Protein family:'''
  
* '''Paralogous protein(s):''' [[YwaC]]
+
* '''Paralogous protein(s):''' [[SasA]]
  
 
=== Extended information on the protein ===
 
=== Extended information on the protein ===

Revision as of 16:00, 6 February 2014

  • Description: (p)ppGpp synthetase

Gene name yjbM
Synonyms
Essential no
Product (p)ppGpp synthetase
Function ppGpp synthesis independent from stringent response
Gene expression levels in SubtiExpress: sasB
MW, pI 24 kDa, 6.708
Gene length, protein length 633 bp, 211 aa
Immediate neighbours yjbL, nadF
Sequences Protein DNA DNA_with_flanks
Genetic context
YjbM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YjbM expression.png















Categories containing this gene/protein

metabolism of signalling nucleotides

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU11600

Phenotypes of a mutant

  • a relA sasA sasB triple mutant requires branched chain amino acids, methionine and threonine for growth, the requirement can be suppressed by reduced expression of guaB or inactivation of codY PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): SasA

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during exponential growth
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References