Difference between revisions of "Rpe"
Line 58: | Line 58: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU15790&redirect=T BSU15790] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
+ | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU15790&redirect=T BSU15790] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1tqj 1TQJ] (from ''Synechocystis sp.'', 61% identity, 75% similarity) {{PubMed|15333955}} | * '''Structure:''' [http://www.rcsb.org/pdb/cgi/explore.cgi?pdbId=1tqj 1TQJ] (from ''Synechocystis sp.'', 61% identity, 75% similarity) {{PubMed|15333955}} |
Revision as of 13:41, 2 April 2014
- Description: ribulose 5-phosphate 3-epimerase
Gene name | rpe |
Synonyms | yloR |
Essential | no |
Product | ribulose 5-phosphate 3-epimerase |
Function | pentose phosphate pathway |
Gene expression levels in SubtiExpress: rpe | |
Metabolic function and regulation of this protein in SubtiPathways: rpe | |
MW, pI | 23 kDa, 5.651 |
Gene length, protein length | 651 bp, 217 aa |
Immediate neighbours | cpgA, yloS |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15790
Phenotypes of a mutant
Database entries
- BsubCyc: BSU15790
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-ribulose 5-phosphate = D-xylulose 5-phosphate (according to Swiss-Prot)
- Protein family: ribulose-phosphate 3-epimerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU15790
- UniProt: O34557
- KEGG entry: [2]
- E.C. number: 5.1.3.1
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References