Difference between revisions of "YxdK"

From SubtiWiki
Jump to: navigation, search
Line 62: Line 62:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39650&redirect=T BSU39650]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxdJK.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yxdJK.html]
Line 99: Line 100:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU39650&redirect=T BSU39650]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 15:13, 2 April 2014

Gene name yxdK
Synonyms
Essential no
Product two-component sensor kinase
Function resistance against toxic peptides
Gene expression levels in SubtiExpress: yxdK
Interactions involving this protein in SubtInteract: YxdK
MW, pI 37 kDa, 6.226
Gene length, protein length 975 bp, 325 aa
Immediate neighbours yxdL, yxdJ
Sequences Protein DNA DNA_with_flanks
Genetic context
YxdK context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YxdK expression.png
























Categories containing this gene/protein

protein modification, transcription factors and their control, resistance against toxins/ antibiotics, membrane proteins, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU39650

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: autophosphorylation, phosphorylation of YxdJ
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: two transmembrane segments, C-terminal histidine phosphotransferase domain
  • Modification: autophosphorylation on a His residue
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed