Difference between revisions of "YdfI"

From SubtiWiki
Jump to: navigation, search
Line 59: Line 59:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU05420&redirect=T BSU05420]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ydfHI.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ydfHI.html]
Line 98: Line 99:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU05420&redirect=T BSU05420]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:04, 2 April 2014

Gene name ydfI
Synonyms
Essential no
Product two-component response regulator
Function control of ydfJ expression
Gene expression levels in SubtiExpress: ydfI
Interactions involving this protein in SubtInteract: YdfI
MW, pI 23 kDa, 5.378
Gene length, protein length 639 bp, 213 aa
Immediate neighbours ydfH, ydfJ
Sequences Protein DNA DNA_with_flanks
Genetic context
YdfI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdfI expression.png
























Categories containing this gene/protein

transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The YdfI regulon:

The gene

Basic information

  • Locus tag: BSU05420

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation by YdfH on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References