Difference between revisions of "YcbL"

From SubtiWiki
Jump to: navigation, search
Line 61: Line 61:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU02550&redirect=T BSU02550]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ycbLM.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ycbLM.html]
Line 100: Line 101:
  
 
=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU02550&redirect=T BSU02550]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 12:54, 2 April 2014

Gene name ycbL
Synonyms
Essential no
Product two-component response regulator
Function unknown
Gene expression levels in SubtiExpress: ycbL
Interactions involving this protein in SubtInteract: YcbL
MW, pI 25 kDa, 4.917
Gene length, protein length 678 bp, 226 aa
Immediate neighbours ycbK, ycbM
Sequences Protein DNA DNA_with_flanks
Genetic context
YcbL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YcbL expression.png


























Categories containing this gene/protein

transcription factors and their control, phosphoproteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU02550

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: OmpR family of two-component response regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylation by YcbM ( on an aspartate residue, putative)
  • Cofactor(s):
  • Effectors of protein activity: activity is controlled by YcbM-dependent phosphorylation (putative)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672] [WorldCat.org] [DOI] (P p)