Difference between revisions of "YwrB"
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 591 bp, 197 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 591 bp, 197 aa | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[chrS]]'', ''[[ywrA]]'' |
|- | |- | ||
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU36120 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU36120 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU36120 DNA_with_flanks] | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU36120 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU36120 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU36120 DNA_with_flanks] | ||
| Line 45: | Line 45: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | {{SubtiWiki regulon|[[ChrS regulon]]}} | |
=The gene= | =The gene= | ||
| Line 105: | Line 105: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[ywrB]]-[[ywrA]]'' {{PubMed| | + | * '''Operon:''' ''[[chrS]]-[[ywrB]]-[[ywrA]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywrB_3721415_3722008_1 ywrB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywrB_3721415_3722008_1 ywrB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' [[SigA]] {{PubMed|23989926}} |
* '''Regulation:''' | * '''Regulation:''' | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[ChrS]]: transcription repression {{PubMed|23989926}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 136: | Line 137: | ||
=References= | =References= | ||
| − | + | <pubmed> 19581367 22383849 22900751 23989926</pubmed> | |
| − | <pubmed> 19581367 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 09:14, 2 September 2013
- Description: subunit of chromate exporter (with YwrA)
| Gene name | ywrB |
| Synonyms | chr3N |
| Essential | no |
| Product | chromate exporter |
| Function | chromate detoxification |
| Gene expression levels in SubtiExpress: ywrB | |
| Interactions involving this protein in SubtInteract: YwrB | |
| MW, pI | 20 kDa, 9.944 |
| Gene length, protein length | 591 bp, 197 aa |
| Immediate neighbours | chrS, ywrA |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, resistance against toxic metals, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36120
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: O05216
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
