Difference between revisions of "YdaG"

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(References)
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* '''Description:''' general stress protein <br/><br/>
+
* '''Description:''' general stress protein, required for protection against paraquat stress  <br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Product''' || unknown  
 
|style="background:#ABCDEF;" align="center"| '''Product''' || unknown  
 
|-
 
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || survival of ethanol stress and low temperatures
+
|style="background:#ABCDEF;" align="center"|'''Function''' || survival of stress conditions
 
|-
 
|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04220 ydaG]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU04220 ydaG]
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}}
+
{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},
 +
{{SubtiWiki category|[[resistance against oxidative and electrophile stress]]}}
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydaG_473803_474225_1 ydaG] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydaG_473803_474225_1 ydaG] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
 
** ''[[ydaD]]'': [[SigB]] {{PubMed|10220166}}
 
** ''[[ydaD]]'': [[SigB]] {{PubMed|10220166}}
 
** ''[[ydaG]]'': [[SigB]] {{PubMed|10220166}}
 
** ''[[ydaG]]'': [[SigB]] {{PubMed|10220166}}
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=References=
 
=References=
<pubmed>10220166,,15805528,23033921</pubmed>
+
<pubmed>10220166,22582280,15805528,23033921</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 19:12, 15 September 2013

  • Description: general stress protein, required for protection against paraquat stress

Gene name ydaG
Synonyms yzzA
Essential no
Product unknown
Function survival of stress conditions
Gene expression levels in SubtiExpress: ydaG
MW, pI 15 kDa, 5.195
Gene length, protein length 420 bp, 140 aa
Immediate neighbours ydaF, bsrC
Sequences Protein DNA DNA_with_flanks
Genetic context
YdaG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdaG expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress

This gene is a member of the following regulons

SigB regulon

The gene

Basic information

  • Locus tag: BSU04220

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • induced under stress conditions (SigB) PubMed
    • strongly induced in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References