Difference between revisions of "RplN"

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(References)
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplNA_140451_140819_1 rplN] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rplNA_140451_140819_1 rplN] {{PubMed|22383849}}
  
* '''Sigma factor:'''  
+
* '''[[Sigma factor]]:'''  
 
** [[SigA]] two promoters, about 140bp and 200bp upstream of the start codon {{PubMed|9371452}}
 
** [[SigA]] two promoters, about 140bp and 200bp upstream of the start codon {{PubMed|9371452}}
  

Revision as of 10:29, 19 June 2013

Gene name rplN
Synonyms
Essential yes PubMed
Product ribosomal protein L14
Function translation
Gene expression levels in SubtiExpress: rplN
Interactions involving this protein in SubtInteract: RplN
MW, pI 13 kDa, 10.399
Gene length, protein length 366 bp, 122 aa
Immediate neighbours rpsQ, rplX
Sequences Protein DNA DNA_with_flanks
Genetic context
RplN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplN expression.png















Categories containing this gene/protein

translation, essential genes, universally conserved proteins, phosphoproteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01260

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-7 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1WHI (Geobacillus stearothermophilus)
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • strongly repressed in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References